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STRINGSTRING
101251518 protein (Solanum lycopersicum) - STRING interaction network
"101251518" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101251518annotation not available (608 aa)    
Predicted Functional Partners:
101258663
Uncharacterized protein; Basal transcription factor complex subunit-related (290 aa)
     
 
  0.996
101255497
RAD3-like DNA-binding helicase protein (758 aa)
     
 
  0.995
101265536
Uncharacterized protein; Cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related (188 aa)
     
 
  0.995
Solyc08g079610.2.1
annotation not available (70 aa)
       
 
  0.995
101244148
RNA polymerase II transcription factor B subunit 2; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (453 aa)
     
 
  0.993
GTF2H2
Uncharacterized protein; General transcription factor II H2 (316 aa)
     
 
  0.992
101253215
annotation not available (419 aa)
     
 
  0.990
101251406
annotation not available (768 aa)
     
 
  0.990
101260299
5’-3’ exonuclease family protein (1539 aa)
     
 
  0.987
Solyc07g005950.2.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (955 aa)
       
      0.982
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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