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Solyc10g005910.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g005910.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g005910.2.1Uncharacterized protein; GTP binding;GTP binding (710 aa)    
Predicted Functional Partners:
101258352
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (288 aa)
   
   
  0.939
101256323
Glucose-inhibited division family A protein (707 aa)
   
 
  0.907
Solyc12g006310.1.1
annotation not available (260 aa)
   
 
  0.780
101254614
annotation not available (481 aa)
   
 
  0.780
Solyc07g044810.2.1
annotation not available (339 aa)
   
 
  0.780
101249351
annotation not available (386 aa)
   
 
  0.780
101248429
annotation not available (386 aa)
   
 
  0.780
Solyc00g030520.2.1
annotation not available (241 aa)
   
 
  0.780
101266453
Uncharacterized protein; transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases (484 aa)
   
 
  0.767
101260312
Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA- ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, - His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily (399 aa)
     
   
  0.587
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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