STRINGSTRING
Solyc10g006280.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g006280.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g006280.1.1Uncharacterized protein (123 aa)    
Predicted Functional Partners:
Solyc06g082580.2.1
Uncharacterized protein (303 aa)
     
  0.956
Solyc10g084670.1.1
Eukaryotic translation initiation factor 3 subunit 10 ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (943 aa)
     
  0.953
Solyc09g010460.2.1
Eukaryotic translation initiation factor 3 subunit 10 ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (1016 aa)
     
  0.953
Solyc03g034440.2.1
Uncharacterized protein (413 aa)
     
  0.953
Solyc03g034430.1.1
Uncharacterized protein (442 aa)
     
  0.953
Solyc02g091220.1.1
Uncharacterized protein (450 aa)
     
  0.953
Solyc02g091210.1.1
Uncharacterized protein (450 aa)
     
  0.953
Solyc03g095840.2.1
Uncharacterized protein (344 aa)
     
  0.947
Solyc05g050200.2.1
Uncharacterized protein ; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (145 aa)
     
 
  0.937
Solyc01g095410.2.1
Uncharacterized protein ; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (144 aa)
     
 
  0.937
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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