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101243746 protein (Solanum lycopersicum) - STRING interaction network
"101243746" - Trafficking protein particle complex subunit in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101243746Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi (186 aa)    
Predicted Functional Partners:
101257356
Transport protein particle (TRAPP) component (194 aa)
     
 
  0.967
101264318
Transport protein particle (TRAPP) component (175 aa)
     
 
  0.966
Solyc06g068030.2.1
SNARE-like superfamily protein (137 aa)
     
 
  0.966
Solyc03g007680.2.1
SNARE-like superfamily protein (175 aa)
     
 
  0.965
101249127
SNARE-like superfamily protein (141 aa)
     
 
  0.965
101266526
Uncharacterized protein; TRS120 (1185 aa)
       
 
  0.962
101244236
SNARE-like superfamily protein (143 aa)
     
 
  0.955
101264146
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (1268 aa)
       
 
  0.947
Solyc07g063450.1.1
annotation not available (915 aa)
     
 
  0.934
101247141
Uncharacterized protein; CLUB (1254 aa)
     
 
  0.932
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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