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Solyc10g006530.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g006530.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g006530.2.1Uncharacterized protein; PsbQ-like 1 (146 aa)    
Predicted Functional Partners:
101266364
Uncharacterized protein; NAD(P)H dehydrogenase 18 (216 aa)
     
   
  0.987
101245163
Uncharacterized protein; PsbQ-like 2 (193 aa)
     
   
  0.986
101252151
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (260 aa)
     
   
  0.967
101247416
Uncharacterized protein; NDH-dependent cyclic electron flow 1 (463 aa)
     
   
  0.959
101265478
Uncharacterized protein; Oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor (253 aa)
     
   
  0.940
101263383
Uncharacterized protein; NDH-dependent cyclic electron flow 1 (351 aa)
     
   
  0.931
PsbQ
Photosystem II oxygen-evolving complex protein 3 (230 aa)
     
 
  0.909
101243784
Uncharacterized protein; Chlororespiratory reduction 3 (146 aa)
     
   
  0.895
101256723
PsbP-like protein 2 (227 aa)
     
   
  0.888
101263149
alpha/beta-Hydrolases superfamily protein (384 aa)
     
        0.867
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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