• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101248241 protein (Solanum lycopersicum) - STRING interaction network
"101248241" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248241Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (577 aa)    
Predicted Functional Partners:
Solyc09g011430.1.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- root; Has 31 Blast hits to 31 proteins in 9 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; /.../s - 31; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (142 aa)
           
  0.890
101252725
annotation not available (542 aa)
           
  0.687
101255908
annotation not available (544 aa)
           
  0.687
Solyc01g094680.2.1
annotation not available (539 aa)
           
  0.687
Solyc09g011110.1.1
annotation not available (182 aa)
           
  0.680
101260750
annotation not available (321 aa)
           
  0.634
101268706
annotation not available (328 aa)
           
  0.634
101253722
annotation not available (318 aa)
           
  0.634
101264877
annotation not available (360 aa)
           
  0.553
101255676
annotation not available (532 aa)
           
  0.515
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]