STRINGSTRING
Solyc10g006740.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g006740.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g006740.2.1Uncharacterized protein (146 aa)    
Predicted Functional Partners:
Solyc11g011150.1.1
Uncharacterized protein (928 aa)
       
  0.964
Solyc02g068340.2.1
Uncharacterized protein (1265 aa)
       
  0.943
Solyc12g035670.1.1
Uncharacterized protein (1565 aa)
       
 
  0.934
Solyc06g061120.2.1
Uncharacterized protein (417 aa)
       
 
  0.934
Solyc04g007120.2.1
Uncharacterized protein (409 aa)
       
  0.762
Solyc03g117780.2.1
Uncharacterized protein (366 aa)
       
  0.762
rad23
RAD23 protein (389 aa)
       
  0.762
Solyc02g063130.2.1
Uncharacterized protein (383 aa)
       
  0.762
Solyc12g049440.1.1
Uncharacterized protein (217 aa)
     
  0.730
Solyc11g065990.1.1
Uncharacterized protein (377 aa)
     
  0.730
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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