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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Ubc13-2 protein (Solanum lycopersicum) - STRING interaction network
"Ubc13-2" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubc13-2annotation not available (153 aa)    
Predicted Functional Partners:
Suv
annotation not available (160 aa)
     
 
  0.948
101267560
Protein kinases;ubiquitin-protein ligases (1633 aa)
       
 
  0.888
101247472
annotation not available (1846 aa)
     
 
  0.839
101257890
Ubiquitin-protein ligase 4 (1553 aa)
     
 
  0.839
Solyc01g111530.2.1
annotation not available (1860 aa)
     
 
  0.839
101254909
Carboxyl terminus of HSC70-interacting protein (276 aa)
     
 
  0.821
Solyc01g102270.2.1
Uncharacterized protein; Anaphase-promoting complex/cyclosome 11 (50 aa)
       
 
  0.816
Fni3
annotation not available (153 aa)
         
0.802
101253520
annotation not available (1084 aa)
   
 
  0.793
Solyc06g007320.2.1
annotation not available (1019 aa)
   
 
  0.793
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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