STRINGSTRING
Solyc10g007770.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g007770.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g007770.2.1Uncharacterized protein (849 aa)    
Predicted Functional Partners:
Solyc10g076270.1.1
Uncharacterized protein (616 aa)
     
 
  0.667
Solyc10g076260.1.1
Uncharacterized protein (542 aa)
     
 
  0.667
Solyc09g014780.2.1
Uncharacterized protein (1353 aa)
     
 
  0.667
Solyc04g078210.1.1
Uncharacterized protein (553 aa)
     
   
  0.434
Solyc04g073980.2.1
Uncharacterized protein (649 aa)
     
   
  0.434
Solyc01g028800.1.1
Uncharacterized protein (741 aa)
     
   
  0.434
Solyc11g069570.1.1
Cytokinin riboside 5’-monophosphate phosphoribohydrolase ; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (234 aa)
           
  0.408
SlLOG6
Cytokinin riboside 5’-monophosphate phosphoribohydrolase LOG6; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (220 aa)
           
  0.408
SlLOG7
Cytokinin riboside 5’-monophosphate phosphoribohydrolase LOG7; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (217 aa)
           
  0.408
Solyc09g007830.2.1
Cytokinin riboside 5’-monophosphate phosphoribohydrolase ; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (218 aa)
           
  0.408
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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