• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101258790 protein (Solanum lycopersicum) - STRING interaction network
"101258790" - Secretory carrier-associated membrane protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258790Secretory carrier-associated membrane protein; Probably involved in membrane trafficking (265 aa)    
Predicted Functional Partners:
101263834
Uncharacterized protein; SPA1-related 2 (1052 aa)
           
  0.571
101266581
mraW methylase family protein (438 aa)
           
  0.463
101259624
Unknown protein; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF1630 (InterPro-IPR012860); Has 290 Blast hits to 263 proteins in 104 species- Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 30; Plants - 49; Viruses - 0; Other Eukaryotes /.../(source- NCBI BLink) (659 aa)
           
  0.461
101243872
annotation not available (676 aa)
           
  0.461
101245144
annotation not available (416 aa)
           
  0.448
101247851
annotation not available (412 aa)
           
  0.448
101252023
Vesicle-associated membrane protein 724; Belongs to the synaptobrevin family (221 aa)
     
 
  0.445
Solyc11g005000.1.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknow /.../tion KRTCAP2 (InterPro-IPR018614); Has 141 Blast hits to 141 proteins in 57 species- Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source- NCBI BLink) (114 aa)
           
  0.434
101245031
annotation not available (374 aa)
           
  0.428
Solyc08g063000.2.1
annotation not available (352 aa)
           
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]