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LOC543709 protein (Solanum lycopersicum) - STRING interaction network
"LOC543709" - Putative sphingolipid delta 4 desaturase DES-1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543709Putative sphingolipid delta 4 desaturase DES-1 (332 aa)    
Predicted Functional Partners:
Solyc09g092120.2.1
annotation not available (190 aa)
     
 
  0.971
101257860
annotation not available (255 aa)
     
 
  0.971
Solyc06g054340.1.1
annotation not available (190 aa)
     
 
  0.968
Asc-1
Protein ASC1; Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (308 aa)
         
  0.956
101252975
annotation not available (302 aa)
         
  0.956
101267275
Uncharacterized protein; LAG1 homologue 2 (288 aa)
         
  0.956
Solyc05g008790.2.1
Diacylglycerol kinase family protein (604 aa)
         
  0.956
101263975
annotation not available (486 aa)
         
  0.953
101256244
annotation not available (477 aa)
         
  0.953
101251446
Uncharacterized protein; Neutral/alkaline non-lysosomal ceramidase (764 aa)
         
  0.942
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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