STRINGSTRING
LOC543709 protein (Solanum lycopersicum) - STRING interaction network
"LOC543709" - Putative sphingolipid delta 4 desaturase DES-1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543709Putative sphingolipid delta 4 desaturase DES-1 (332 aa)    
Predicted Functional Partners:
asc-1
ASC1-like protein ; Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (By similarity) (305 aa)
         
  0.941
Asc-1
Protein ASC1 ; Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (308 aa)
         
  0.941
Solyc03g113050.1.1
Uncharacterized protein (302 aa)
         
  0.941
Solyc01g108230.2.1
Uncharacterized protein (288 aa)
         
  0.941
Solyc05g007460.2.1
Uncharacterized protein (269 aa)
   
 
    0.902
Solyc01g010860.2.1
Uncharacterized protein (266 aa)
   
 
    0.902
Solyc09g091850.2.1
Non-lysosomal glucosylceramidase ; Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (936 aa)
         
  0.901
Solyc01g103230.2.1
Non-lysosomal glucosylceramidase ; Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (954 aa)
         
  0.901
Solyc09g092120.2.1
Uncharacterized protein (190 aa)
         
    0.900
Solyc05g053740.2.1
Uncharacterized protein (255 aa)
         
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]