STRINGSTRING
Solyc10g009390.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g009390.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g009390.2.1Uncharacterized protein (556 aa)    
Predicted Functional Partners:
Solyc02g088710.2.1
Uncharacterized protein (553 aa)
   
 
  0.690
Solyc10g007880.2.1
Uncharacterized protein (510 aa)
   
     
  0.657
Solyc07g055540.2.1
Uncharacterized protein (517 aa)
   
     
  0.657
Solyc07g055440.1.1
Uncharacterized protein (517 aa)
   
     
  0.656
Solyc10g007890.2.1
Uncharacterized protein (523 aa)
   
     
  0.655
Solyc07g006140.2.1
Uncharacterized protein (517 aa)
   
     
  0.655
Solyc07g055530.2.1
Uncharacterized protein (467 aa)
   
     
  0.654
Solyc05g011940.2.1
Uncharacterized protein (501 aa)
   
     
  0.651
Solyc12g006460.1.1
Uncharacterized protein (487 aa)
   
     
  0.649
Solyc10g007930.2.1
Uncharacterized protein (390 aa)
   
     
  0.649
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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