STRINGSTRING
Solyc10g009490.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g009490.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g009490.1.1Uncharacterized protein (1348 aa)    
Predicted Functional Partners:
Solyc06g051780.2.1
Uncharacterized protein (240 aa)
           
  0.516
Solyc11g072430.1.1
Uncharacterized protein (247 aa)
     
   
  0.507
Solyc11g072420.1.1
Uncharacterized protein (914 aa)
     
   
  0.507
Solyc04g010080.2.1
Uncharacterized protein (729 aa)
           
  0.461
Solyc03g005930.2.1
Uncharacterized protein (221 aa)
           
  0.459
Solyc02g071750.2.1
Uncharacterized protein (195 aa)
           
  0.459
Solyc05g055770.2.1
Uncharacterized protein (411 aa)
           
  0.429
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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