STRINGSTRING
Solyc10g009500.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g009500.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g009500.2.1Uncharacterized protein (186 aa)    
Predicted Functional Partners:
Solyc03g118270.1.1
Uncharacterized protein (363 aa)
   
  0.665
Solyc02g084210.1.1
Uncharacterized protein (361 aa)
   
  0.665
Solyc11g072090.1.1
Uncharacterized protein (461 aa)
   
 
  0.657
Solyc09g011220.2.1
Uncharacterized protein (361 aa)
   
 
  0.657
Solyc06g051270.2.1
Uncharacterized protein (361 aa)
   
 
  0.657
Solyc03g113790.2.1
Uncharacterized protein (415 aa)
   
 
  0.657
GMP
GDP-mannose pyrophosphorylase (361 aa)
   
 
  0.657
Solyc01g098180.2.1
Uncharacterized protein (732 aa)
   
 
  0.657
Solyc12g055930.1.1
Uncharacterized protein (348 aa)
     
  0.612
Solyc12g010540.1.1
Uncharacterized protein (432 aa)
     
  0.612
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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