STRINGSTRING
Solyc10g009640.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g009640.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g009640.1.1Uncharacterized protein (597 aa)    
Predicted Functional Partners:
COP1
COP1 homolog (677 aa)
     
 
  0.560
Coi1
Coronatine-insensitive 1 (603 aa)
           
  0.485
EBF1
EIN3-binding F-box protein 1; EIN3-binding F-box protein 2 (637 aa)
           
  0.422
Solyc07g008250.2.1
Uncharacterized protein (641 aa)
           
  0.422
Solyc06g069790.2.1
Uncharacterized protein (104 aa)
           
  0.422
Solyc11g011980.1.1
Uncharacterized protein (672 aa)
     
 
  0.416
EIN2
Ethylene signaling protein (1316 aa)
           
  0.403
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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