STRINGSTRING
Solyc10g012160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g012160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g012160.2.1Uncharacterized protein (331 aa)    
Predicted Functional Partners:
Solyc04g074150.1.1
Uncharacterized protein (115 aa)
     
 
  0.910
Solyc01g088350.2.1
Uncharacterized protein (172 aa)
     
  0.874
Solyc11g070030.1.1
Uncharacterized protein (213 aa)
       
  0.813
Solyc02g063080.1.1
Uncharacterized protein (68 aa)
       
  0.813
ndhK
NAD(P)H-quinone oxidoreductase subunit K, chloroplastic ; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (225 aa)
       
  0.813
Solyc08g007440.1.1
Uncharacterized protein (303 aa)
   
 
  0.793
Solyc02g087640.2.1
Uncharacterized protein (482 aa)
   
 
  0.775
Solyc07g032420.1.1
Uncharacterized protein (186 aa)
         
  0.734
Solyc01g008520.2.1
Uncharacterized protein (338 aa)
       
      0.720
Solyc10g081530.1.1
Uncharacterized protein (351 aa)
 
   
      0.703
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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