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Solyc10g012190.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g012190.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g012190.1.1Uncharacterized protein (687 aa)    
Predicted Functional Partners:
rpl33
50S ribosomal protein L33, chloroplastic (66 aa)
       
 
  0.687
Solyc04g016390.1.1
Uncharacterized protein (60 aa)
       
 
  0.687
Solyc04g010100.1.1
Annotation not available (60 aa)
       
 
  0.687
Solyc01g007450.1.1
50S ribosomal protein L33, chloroplastic (66 aa)
       
 
  0.687
Solyc12g013990.1.1
Uncharacterized protein (398 aa)
     
 
  0.666
Solyc11g068420.1.1
Ribosomal protein (216 aa)
     
 
  0.666
Solyc06g074300.2.1
Ribosomal protein (216 aa)
     
 
  0.666
Solyc01g087730.2.1
Ribosomal protein (338 aa)
     
 
  0.666
Solyc01g009520.2.1
Ribosomal protein (216 aa)
     
 
  0.666
Solyc12g010930.1.1
Uncharacterized protein (181 aa)
   
      0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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