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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc10g017600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g017600.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g017600.2.1annotation not available (456 aa)    
Predicted Functional Partners:
Solyc03g118580.2.1
annotation not available (177 aa)
     
   
  0.763
Solyc10g008570.2.1
Uncharacterized protein; Pentatricopeptide repeat (PPR-like) superfamily protein; Belongs to the syntaxin family (872 aa)
           
  0.763
Solyc08g080110.2.1
Protein of unknown function (DUF544) (656 aa)
           
  0.763
101267740
Uncharacterized protein; Calcineurin B subunit-related (548 aa)
           
  0.763
101258677
annotation not available (202 aa)
     
   
  0.674
101247130
annotation not available (192 aa)
     
   
  0.674
101246037
annotation not available (197 aa)
           
  0.673
101255910
annotation not available (198 aa)
           
  0.673
101251855
annotation not available (432 aa)
         
  0.657
101245594
annotation not available (435 aa)
         
  0.657
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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