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STRINGSTRING
Solyc10g017650.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g017650.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g017650.1.1annotation not available (1119 aa)    
Predicted Functional Partners:
101252788
Phospholipase A2 family protein (156 aa)
         
  0.843
101244700
Uncharacterized protein; Non-specific phospholipase C1 (543 aa)
         
  0.795
101248078
Uncharacterized protein; Non-specific phospholipase C6 (525 aa)
         
  0.795
Solyc01g008790.2.1
Uncharacterized protein; Non-specific phospholipase C2 (447 aa)
         
  0.790
LOC543838
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine; Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily (445 aa)
       
  0.778
PSD2
Phosphatidylserine decarboxylase proenzyme 2; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine; Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily (648 aa)
       
  0.772
101267419
Phospholipid/glycerol acyltransferase family protein; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family (371 aa)
     
  0.740
Solyc10g084540.1.1
annotation not available (1563 aa)
     
  0.736
101243737
Lipin family protein (892 aa)
     
  0.735
Solyc04g079100.2.1
annotation not available (965 aa)
     
  0.735
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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