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LOC543655 protein (Solanum lycopersicum) - STRING interaction network
"LOC543655" - Putative uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543655Putative uncharacterized protein (235 aa)    
Predicted Functional Partners:
Solyc05g054950.2.1
Peroxin-12 ; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
 
  0.813
Solyc04g080930.2.1
Uncharacterized protein (397 aa)
     
 
  0.805
Solyc06g071470.2.1
Uncharacterized protein (527 aa)
       
 
  0.783
Solyc03g114330.2.1
Uncharacterized protein (399 aa)
       
 
  0.783
Solyc06g060720.2.1
Uncharacterized protein (248 aa)
       
 
  0.775
Solyc10g005650.2.1
Uncharacterized protein (744 aa)
     
 
  0.682
Solyc04g055120.2.1
Uncharacterized protein (1344 aa)
     
 
  0.661
Solyc10g047050.1.1
Uncharacterized protein (771 aa)
       
 
  0.646
Solyc12g094450.1.1
Uncharacterized protein (310 aa)
     
 
  0.616
Solyc06g075000.2.1
Uncharacterized protein (165 aa)
     
 
  0.616
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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