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STRINGSTRING
Solyc10g018450.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g018450.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g018450.1.1annotation not available (79 aa)    
Predicted Functional Partners:
MET
DNA (cytosine-5)-methyltransferase; Cytosine-specific methyltransferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (1559 aa)
       
 
  0.578
101263628
Uncharacterized protein; DNA methyltransferase-2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (381 aa)
       
 
  0.570
Solyc06g010200.2.1
annotation not available (1613 aa)
       
 
  0.563
101251648
annotation not available (430 aa)
     
 
  0.548
101254943
Histone deacetylase 1; Belongs to the histone deacetylase family. HD Type 1 subfamily (498 aa)
     
 
  0.548
101258377
annotation not available (471 aa)
     
 
  0.548
101256864
annotation not available (449 aa)
     
 
  0.548
101262870
annotation not available (487 aa)
       
 
  0.480
101253012
Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) (670 aa)
           
  0.467
MLH1
Uncharacterized protein; MLH1 (728 aa)
     
 
  0.437
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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