STRINGSTRING
Solyc10g019040.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g019040.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g019040.1.1Uncharacterized protein (453 aa)    
Predicted Functional Partners:
Solyc01g104570.2.1
Uncharacterized protein (577 aa)
     
  0.994
Solyc01g104520.1.1
Uncharacterized protein (169 aa)
     
  0.994
Solyc07g053820.2.1
Uncharacterized protein (529 aa)
     
  0.981
Solyc06g051040.2.1
Uncharacterized protein (588 aa)
     
  0.981
Solyc03g112550.2.1
Uncharacterized protein (316 aa)
     
  0.978
Solyc03g025470.2.1
Kinesin-like protein (668 aa)
     
  0.916
Solyc11g072820.1.1
Uncharacterized protein (1052 aa)
     
  0.891
Solyc10g086340.1.1
Uncharacterized protein (1044 aa)
     
  0.891
Solyc10g083310.1.1
Uncharacterized protein (1010 aa)
     
  0.891
Solyc09g090320.1.1
Kinesin-like protein (937 aa)
     
  0.891
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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