STRINGSTRING
Solyc10g044450.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g044450.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g044450.1.1Uncharacterized protein (481 aa)    
Predicted Functional Partners:
Solyc04g049770.2.1
Uncharacterized protein (423 aa)
     
  0.994
Solyc08g077420.2.1
Uncharacterized protein (1274 aa)
     
  0.994
Solyc08g007110.2.1
Uncharacterized protein (1264 aa)
     
  0.994
Solyc03g093680.2.1
Mago nashi protein (151 aa)
     
  0.984
UPF2
Regulator of nonsense transcripts UPF2 (769 aa)
     
  0.976
Y14
RNA-binding protein 8A (195 aa)
       
  0.953
Solyc12g096000.1.1
Uncharacterized protein (394 aa)
       
  0.931
Solyc12g095990.1.1
Uncharacterized protein (413 aa)
       
  0.931
Solyc08g080550.1.1
Uncharacterized protein (548 aa)
       
  0.931
Solyc08g062800.2.1
Uncharacterized protein (413 aa)
       
  0.931
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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