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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101260281 protein (Solanum lycopersicum) - STRING interaction network
"101260281" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101260281annotation not available (638 aa)    
Predicted Functional Partners:
Solyc08g078680.2.1
Uncharacterized protein; Sec14p-like phosphatidylinositol transfer family protein (480 aa)
           
  0.604
101262630
annotation not available (817 aa)
     
 
  0.602
101266536
Proteasome activating protein 200 (1813 aa)
     
   
  0.571
101256583
Uncharacterized protein; Carboxypeptidase D, putative (485 aa)
     
   
  0.569
101268481
Uncharacterized protein; Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (423 aa)
           
  0.564
Solyc03g083330.2.1
Prolyl oligopeptidase family protein (753 aa)
           
  0.564
Solyc07g017640.2.1
annotation not available (410 aa)
           
  0.548
Solyc11g068880.1.1
annotation not available (141 aa)
           
  0.523
Solyc09g007640.2.1
annotation not available (503 aa)
     
 
  0.521
101244869
annotation not available (451 aa)
     
 
  0.521
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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