STRINGSTRING
Solyc10g044780.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g044780.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g044780.1.1Uncharacterized protein (440 aa)    
Predicted Functional Partners:
Solyc03g117530.1.1
Uncharacterized protein (302 aa)
     
  0.981
Solyc08g044480.1.1
Uncharacterized protein (139 aa)
     
  0.981
Solyc04g026070.1.1
Uncharacterized protein (121 aa)
     
  0.981
Solyc06g009680.2.1
Uncharacterized protein (1237 aa)
     
  0.901
Solyc01g068260.2.1
Uncharacterized protein (983 aa)
     
  0.901
Solyc02g083600.2.1
Uncharacterized protein (599 aa)
     
  0.895
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
 
  0.888
Solyc01g111870.1.1
Uncharacterized protein (2728 aa)
     
  0.883
Solyc06g071490.1.1
Uncharacterized protein (1135 aa)
     
  0.823
Solyc03g112950.2.1
Uncharacterized protein (1501 aa)
     
  0.823
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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