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STRINGSTRING
Solyc10g044830.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g044830.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g044830.1.1annotation not available (247 aa)    
Predicted Functional Partners:
Solyc06g049040.2.1
annotation not available (331 aa)
       
 
  0.433
101248981
annotation not available (349 aa)
       
 
  0.433
101245758
Uncharacterized protein; Basic region/leucine zipper motif 60 (284 aa)
           
  0.412
101258871
Unknown protein; Has 44 Blast hits to 44 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (188 aa)
           
  0.412
LOC544256
Uncharacterized protein; TAGL12 transcription factor (201 aa)
           
  0.408
101249403
Uncharacterized protein; ENHANCED DOWNY MILDEW 2 (1279 aa)
           
  0.408
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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