STRINGSTRING
Solyc10g044840.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g044840.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g044840.1.1Uncharacterized protein (298 aa)    
Predicted Functional Partners:
Solyc03g121530.2.1
Uncharacterized protein (236 aa)
 
     
  0.552
Solyc07g063510.2.1
Uncharacterized protein (449 aa)
   
     
  0.451
Solyc11g010900.1.1
Uncharacterized protein (338 aa)
   
   
  0.439
Solyc08g077850.1.1
Uncharacterized protein (1829 aa)
   
   
  0.439
Solyc05g017990.2.1
Uncharacterized protein (449 aa)
   
   
  0.439
Solyc02g088540.2.1
Uncharacterized protein (368 aa)
   
   
  0.439
Solyc01g080470.2.1
Uncharacterized protein (221 aa)
   
   
  0.439
Solyc00g017900.1.1
Annotation not available (141 aa)
   
   
  0.439
Solyc12g008780.1.1
Uncharacterized protein (293 aa)
   
        0.434
Solyc10g006040.1.1
Uncharacterized protein (365 aa)
   
        0.434
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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