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Solyc10g045310.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g045310.1.1" - Protein of unknown function in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g045310.1.1Protein of unknown function (DUF3531) (229 aa)    
Predicted Functional Partners:
101262377
annotation not available (338 aa)
     
        0.858
Solyc01g057060.1.1
annotation not available (91 aa)
     
        0.858
Solyc06g019200.2.1
Uncharacterized protein; Ethylene-dependent gravitropism-deficient and yellow-green-like 2 (468 aa)
     
        0.846
Solyc03g080010.2.1
DNA mismatch repair protein MutS, type 2 (826 aa)
     
        0.832
Solyc11g069240.1.1
annotation not available (449 aa)
       
 
  0.776
101261125
annotation not available (528 aa)
       
 
  0.776
Solyc04g008500.2.1
Uncharacterized protein; indeterminate(ID)-domain 5 (517 aa)
       
 
  0.776
101253219
annotation not available (378 aa)
       
 
  0.776
101248731
annotation not available (493 aa)
       
 
  0.660
101250621
annotation not available (459 aa)
       
 
  0.660
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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