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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc10g046930.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g046930.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g046930.1.1annotation not available (766 aa)    
Predicted Functional Partners:
101257709
Ribosomal protein S8e family protein (260 aa)
     
 
  0.992
Solyc10g083600.1.1
Ribosomal RNA processing Brix domain protein (337 aa)
     
 
  0.991
101261490
annotation not available (314 aa)
     
 
  0.990
101255904
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (415 aa)
     
 
  0.989
101249690
Ribosomal protein L24e family protein (166 aa)
     
 
  0.987
Solyc11g066630.1.1
annotation not available (145 aa)
     
 
  0.987
Solyc06g074720.2.1
annotation not available (219 aa)
     
 
  0.987
101247890
NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (564 aa)
   
 
  0.986
Solyc07g052110.2.1
annotation not available (706 aa)
   
 
  0.986
101245183
NOL1/NOP2/sun family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (611 aa)
   
 
  0.986
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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