STRINGSTRING
Solyc10g047090.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g047090.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g047090.1.1Uncharacterized protein (99 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
 
  0.999
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.999
Solyc12g039010.1.1
Cytochrome c oxidase subunit 2 ; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (538 aa)
   
  0.998
Solyc08g083350.2.1
Uncharacterized protein (217 aa)
   
  0.998
Solyc08g075850.2.1
Uncharacterized protein (159 aa)
   
  0.998
Solyc07g063960.2.1
Uncharacterized protein (189 aa)
   
  0.998
Solyc02g082500.1.1
Uncharacterized protein (155 aa)
   
  0.998
Solyc12g088730.1.1
Uncharacterized protein (305 aa)
   
  0.998
Solyc12g035880.1.1
Uncharacterized protein (151 aa)
   
  0.998
Solyc12g014390.1.1
Uncharacterized protein (229 aa)
   
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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