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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc10g047490.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g047490.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g047490.1.1annotation not available (371 aa)    
Predicted Functional Partners:
Solyc02g032060.1.1
Receptor like protein 52 (221 aa)
   
 
      0.478
Solyc11g016930.1.1
annotation not available (197 aa)
   
 
      0.476
Solyc01g108850.2.1
annotation not available (455 aa)
   
 
      0.476
Solyc10g054290.1.1
annotation not available (158 aa)
   
 
      0.473
Solyc07g062940.2.1
annotation not available (716 aa)
     
 
  0.459
Solyc03g083510.2.1
Leucine-rich repeat protein kinase family protein (386 aa)
   
 
      0.447
LRP
LRR protein (221 aa)
   
          0.447
Solyc10g012360.1.1
annotation not available (222 aa)
   
          0.447
Solyc09g064980.1.1
annotation not available (455 aa)
   
          0.447
101249847
annotation not available (335 aa)
   
          0.447
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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