STRINGSTRING
Solyc10g047630.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g047630.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g047630.1.1Uncharacterized protein (410 aa)    
Predicted Functional Partners:
Solyc11g064920.1.1
Uncharacterized protein (534 aa)
   
 
  0.966
Solyc02g084660.2.1
Uncharacterized protein (225 aa)
   
    0.933
Solyc03g122310.2.1
Uncharacterized protein (531 aa)
   
 
  0.911
Solyc06g060250.2.1
Aldehyde dehydrogenase (474 aa)
   
 
  0.908
Solyc08g068190.2.1
Uncharacterized protein (534 aa)
       
  0.908
Solyc05g005700.2.1
Uncharacterized protein (529 aa)
       
  0.908
Solyc03g114150.2.1
Uncharacterized protein (535 aa)
       
  0.908
Solyc02g086970.2.1
Uncharacterized protein (473 aa)
       
  0.908
Solyc01g013900.2.1
Annotation not available (81 aa)
       
  0.908
PYD1A
Putative dehydrogenase (429 aa)
   
 
  0.907
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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