STRINGSTRING
Solyc10g050540.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g050540.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g050540.1.1Uncharacterized protein (741 aa)    
Predicted Functional Partners:
Solyc02g069160.2.1
Uncharacterized protein (509 aa)
     
  0.999
Solyc02g070240.2.1
Uncharacterized protein (671 aa)
     
  0.997
Solyc02g021760.2.1
Uncharacterized protein (689 aa)
     
  0.997
Solyc07g005320.2.1
Uncharacterized protein (1380 aa)
     
  0.997
Solyc12g099280.1.1
Uncharacterized protein (1130 aa)
     
  0.988
Solyc09g065080.1.1
Uncharacterized protein (225 aa)
     
  0.987
Solyc07g049480.2.1
Uncharacterized protein (731 aa)
     
  0.981
Solyc03g025540.2.1
Uncharacterized protein (739 aa)
     
  0.980
Solyc03g111260.2.1
Uncharacterized protein (852 aa)
     
  0.980
Solyc03g007100.2.1
Uncharacterized protein (1425 aa)
     
  0.979
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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