STRINGSTRING
Solyc10g051200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g051200.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g051200.1.1Uncharacterized protein (561 aa)    
Predicted Functional Partners:
Solyc11g021210.1.1
YCF5 (290 aa)
 
     
  0.764
Solyc08g022180.1.1
Uncharacterized protein (195 aa)
 
     
  0.732
Solyc01g017340.1.1
Uncharacterized protein (232 aa)
 
     
  0.725
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
   
  0.606
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
   
   
  0.594
Solyc07g063570.2.1
Uncharacterized protein (382 aa)
 
   
  0.534
Solyc12g035840.1.1
Uncharacterized protein (262 aa)
         
  0.491
Solyc01g111750.2.1
Uncharacterized protein (305 aa)
   
          0.476
Solyc11g071890.1.1
Uncharacterized protein (360 aa)
   
        0.462
Solyc02g062350.2.1
Uncharacterized protein (270 aa)
   
        0.446
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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