STRINGSTRING
Solyc10g052520.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g052520.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g052520.1.1annotation not available (257 aa)    
Predicted Functional Partners:
101252075
annotation not available (685 aa)
           
  0.602
101264611
C2 domain-containing protein (837 aa)
           
  0.597
Solyc05g052950.2.1
Uncharacterized protein; Regulator of chromosome condensation (RCC1) family protein (477 aa)
           
  0.561
Solyc02g081810.2.1
Uncharacterized protein; Homologue of NAP57 (597 aa)
           
  0.561
Solyc04g054480.2.1
Uncharacterized protein; Binding (1774 aa)
           
  0.549
101247314
Protein kinase superfamily protein; Belongs to the protein kinase superfamily (496 aa)
       
 
  0.528
101262454
Protein kinase superfamily protein; Belongs to the protein kinase superfamily (478 aa)
       
 
  0.528
LOC543970
Chorimate mutase (255 aa)
           
  0.519
Solyc09g061930.2.1
Uncharacterized protein; Transmembrane kinase-like 1; Belongs to the protein kinase superfamily (659 aa)
           
  0.446
101260884
annotation not available (774 aa)
           
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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