STRINGSTRING
Solyc10g054870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g054870.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g054870.1.1Uncharacterized protein (312 aa)    
Predicted Functional Partners:
Solyc07g066600.2.1
Phosphoglycerate kinase (401 aa)
  0.999
Solyc07g066610.2.1
Phosphoglycerate kinase (482 aa)
  0.999
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
   
  0.998
Solyc12g094640.1.1
Glyceraldehyde-3-phosphate dehydrogenase (450 aa)
 
  0.996
Solyc10g005510.2.1
Glyceraldehyde-3-phosphate dehydrogenase (419 aa)
 
  0.996
Solyc06g071920.2.1
Glyceraldehyde-3-phosphate dehydrogenase (337 aa)
 
  0.996
Solyc05g005820.2.1
Glyceraldehyde-3-phosphate dehydrogenase (337 aa)
 
  0.996
Solyc04g082630.2.1
Glyceraldehyde-3-phosphate dehydrogenase (476 aa)
 
  0.996
Solyc04g009030.2.1
Glyceraldehyde-3-phosphate dehydrogenase (399 aa)
 
  0.996
Solyc03g111000.2.1
Uncharacterized protein (174 aa)
   
  0.996
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (18%) [HD]