STRINGSTRING
Solyc10g055020.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g055020.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g055020.1.1Uncharacterized protein (203 aa)    
Predicted Functional Partners:
Solyc10g076250.1.1
Uncharacterized protein (478 aa)
   
  0.721
Solyc04g054310.2.1
Mitochondrial alanine-glyoxylate transaminase (473 aa)
   
  0.721
Solyc03g051970.2.1
Uncharacterized protein (404 aa)
     
 
  0.568
asc-1
ASC1-like protein ; Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (By similarity) (305 aa)
       
 
  0.528
Asc-1
Protein ASC1 ; Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (308 aa)
       
 
  0.528
Solyc03g113050.1.1
Uncharacterized protein (302 aa)
       
 
  0.528
Solyc01g108230.2.1
Uncharacterized protein (288 aa)
       
 
  0.528
Solyc03g006630.2.1
Uncharacterized protein (486 aa)
       
 
  0.495
Solyc02g079050.2.1
Uncharacterized protein (769 aa)
       
 
  0.495
Solyc02g079030.2.1
Uncharacterized protein (477 aa)
       
 
  0.495
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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