STRINGSTRING
Solyc10g061980.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g061980.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g061980.1.1Uncharacterized protein (148 aa)    
Predicted Functional Partners:
Solyc01g058010.2.1
Uncharacterized protein (506 aa)
   
          0.527
Solyc01g058020.2.1
Uncharacterized protein (140 aa)
   
          0.526
Solyc03g019880.2.1
Uncharacterized protein (123 aa)
   
          0.494
Solyc10g005830.2.1
Uncharacterized protein (254 aa)
   
          0.486
Solyc06g036030.1.1
Uncharacterized protein (132 aa)
   
          0.479
Solyc05g050110.2.1
Uncharacterized protein (259 aa)
   
          0.473
Solyc01g095270.2.1
Uncharacterized protein (292 aa)
   
          0.464
Solyc01g006740.2.1
Sucrose-phosphatase (435 aa)
   
          0.456
Solyc11g027920.1.1
Uncharacterized protein (115 aa)
   
          0.451
Solyc08g061580.2.1
Uncharacterized protein (135 aa)
   
          0.446
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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