STRINGSTRING
Solyc10g068350.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g068350.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g068350.1.1Uncharacterized protein (86 aa)    
Predicted Functional Partners:
Solyc11g008810.1.1
Beta-hexosaminidase (497 aa)
         
  0.932
Solyc05g054710.2.1
Beta-hexosaminidase 2 (552 aa)
         
  0.932
Solyc01g081610.2.1
Beta-hexosaminidase 1 (575 aa)
         
  0.932
Solyc07g005080.1.1
Uncharacterized protein (386 aa)
 
   
  0.524
Solyc07g005100.2.1
Uncharacterized protein (376 aa)
 
   
  0.523
Solyc06g053380.2.1
Uncharacterized protein (289 aa)
   
          0.519
Solyc04g072000.2.1
Uncharacterized protein (276 aa)
   
          0.518
Solyc07g005110.2.1
Uncharacterized protein (748 aa)
       
  0.517
Solyc10g074460.1.1
Uncharacterized protein (194 aa)
   
          0.510
Solyc07g005090.2.1
Uncharacterized protein (371 aa)
 
   
  0.497
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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