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101259991 protein (Solanum lycopersicum) - STRING interaction network
"101259991" - RNA-binding KH domain-containing protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101259991RNA-binding KH domain-containing protein (282 aa)    
Predicted Functional Partners:
101261458
Uncharacterized protein; RNA polymerase II transcription mediators (1791 aa)
     
      0.749
cdc5
CDC5-like protein (987 aa)
     
      0.747
101259273
annotation not available (201 aa)
       
      0.747
101266907
annotation not available (237 aa)
     
 
  0.702
101249521
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (364 aa)
     
 
  0.696
Solyc08g065630.1.1
annotation not available (599 aa)
     
 
  0.687
Solyc12g095960.1.1
KH domain-containing protein (288 aa)
     
 
  0.686
101264287
annotation not available (765 aa)
     
 
  0.686
Solyc05g016460.1.1
annotation not available (651 aa)
       
      0.676
Solyc05g016440.2.1
annotation not available (1011 aa)
       
      0.676
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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