STRINGSTRING
Solyc10g076250.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g076250.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g076250.1.1Uncharacterized protein (478 aa)    
Predicted Functional Partners:
Solyc08g068190.2.1
Uncharacterized protein (534 aa)
   
  0.968
Solyc06g060250.2.1
Aldehyde dehydrogenase (474 aa)
   
  0.968
Solyc05g005700.2.1
Uncharacterized protein (529 aa)
   
  0.968
Solyc03g122310.2.1
Uncharacterized protein (531 aa)
   
  0.968
Solyc03g114150.2.1
Uncharacterized protein (535 aa)
   
  0.968
Solyc02g086970.2.1
Uncharacterized protein (473 aa)
   
  0.968
Solyc01g013900.2.1
Annotation not available (81 aa)
   
  0.968
Solyc12g099930.1.1
Hop-interacting protein THI032 (401 aa)
   
 
  0.940
Solyc02g022930.2.1
3-hydroxyisobutyrate dehydrogenase (344 aa)
       
    0.927
Solyc12g098490.1.1
Serine hydroxymethyltransferase ; Interconversion of serine and glycine (471 aa)
       
  0.913
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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