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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101246292 protein (Solanum lycopersicum) - STRING interaction network
"101246292" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246292annotation not available (170 aa)    
Predicted Functional Partners:
Solyc09g005010.2.1
annotation not available (1001 aa)
           
  0.763
Solyc04g010120.2.1
LisH/CRA/RING-U-box domains-containing protein (425 aa)
           
  0.763
101262565
annotation not available (352 aa)
           
  0.633
101252662
annotation not available (127 aa)
           
  0.581
Solyc12g006300.1.1
annotation not available (255 aa)
           
  0.581
Solyc07g062910.2.1
annotation not available (220 aa)
           
  0.581
Solyc07g062890.2.1
annotation not available (123 aa)
           
  0.581
101260842
annotation not available (129 aa)
           
  0.581
101248217
annotation not available (580 aa)
           
  0.581
101258261
annotation not available (580 aa)
           
  0.581
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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