STRINGSTRING
Solyc10g076480.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g076480.1.1" - Ammonium transporter in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g076480.1.1Ammonium transporter (483 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
         
  0.743
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
         
  0.727
Solyc01g015000.2.1
Uncharacterized protein (212 aa)
 
   
  0.622
GLB1
PII-like protein (199 aa)
 
   
  0.616
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
           
  0.559
Solyc12g041870.1.1
Glutamine synthetase (359 aa)
         
  0.478
GS1
Glutamine synthetase (354 aa)
         
  0.478
Solyc10g083850.1.1
Uncharacterized protein (833 aa)
         
  0.478
Solyc10g083840.1.1
Uncharacterized protein (161 aa)
         
  0.478
Solyc10g083830.1.1
Uncharacterized protein (613 aa)
         
  0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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