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STRINGSTRING
101253638 protein (Solanum lycopersicum) - STRING interaction network
"101253638" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101253638annotation not available (1285 aa)    
Predicted Functional Partners:
cdc5
CDC5-like protein (987 aa)
 
 
 
  0.985
Solyc07g007210.2.1
annotation not available (925 aa)
     
 
  0.971
101253956
Uncharacterized protein; CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor (451 aa)
     
 
  0.965
101245976
Uncharacterized protein; Family of unknown function (DUF572) (332 aa)
     
 
  0.961
101263464
annotation not available (521 aa)
     
 
  0.959
101248760
U2 small nuclear ribonucleoprotein A (286 aa)
     
 
  0.958
101260632
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (436 aa)
     
 
  0.955
101258325
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (570 aa)
     
 
  0.955
101261833
annotation not available (2384 aa)
     
 
  0.950
Solyc06g043160.1.1
annotation not available (52 aa)
     
 
  0.950
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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