STRINGSTRING
Solyc10g078170.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g078170.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g078170.1.1Uncharacterized protein (566 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
        0.560
Solyc11g043120.1.1
Uncharacterized protein (517 aa)
     
 
  0.506
Solyc11g005910.1.1
Uncharacterized protein (1134 aa)
     
   
  0.502
Solyc12g099700.1.1
Uncharacterized protein (542 aa)
     
   
  0.446
Solyc12g099730.1.1
Uncharacterized protein (477 aa)
     
   
  0.443
Solyc12g099680.1.1
Uncharacterized protein (478 aa)
     
   
  0.443
Solyc12g056200.1.1
Uncharacterized protein (508 aa)
     
   
  0.443
Solyc12g005730.1.1
Uncharacterized protein (479 aa)
     
   
  0.443
Solyc11g072700.1.1
Uncharacterized protein (496 aa)
     
   
  0.443
Solyc11g065480.1.1
Uncharacterized protein (477 aa)
     
   
  0.443
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (15%) [HD]