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STRINGSTRING
101268236 protein (Solanum lycopersicum) - STRING interaction network
"101268236" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101268236annotation not available (141 aa)    
Predicted Functional Partners:
101244245
Uncharacterized protein; MAP kinase substrate 1 (231 aa)
     
   
  0.851
Solyc10g019160.1.1
annotation not available (100 aa)
       
 
  0.787
101255501
annotation not available (535 aa)
       
 
  0.787
Solyc03g007370.2.1
Uncharacterized protein; Sigma factor E (515 aa)
       
 
  0.738
101254158
annotation not available (263 aa)
           
  0.688
101249467
VQ motif-containing protein (240 aa)
           
  0.670
101262412
VQ motif-containing protein (323 aa)
           
  0.636
101263246
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released (613 aa)
       
 
  0.614
101247821
WRKY DNA-binding protein 57 (327 aa)
       
 
  0.591
Solyc12g088490.1.1
VQ motif-containing protein (162 aa)
           
  0.571
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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