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101253335 protein (Solanum lycopersicum) - STRING interaction network
"101253335" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101253335Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- plasma membrane, chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; Has 166 Blast hits to 166 proteins i /.../pecies- Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source- NCBI BLink) (635 aa)    
Predicted Functional Partners:
101250078
ARM repeat superfamily protein (674 aa)
           
  0.890
Solyc04g082560.2.1
Calcium-binding EF hand family protein (1228 aa)
     
 
  0.840
Solyc02g082540.2.1
annotation not available (1040 aa)
     
 
  0.840
Solyc02g082530.1.1
annotation not available (97 aa)
     
 
  0.840
Solyc00g007120.2.1
annotation not available (750 aa)
     
 
  0.840
Solyc00g007110.2.1
annotation not available (447 aa)
     
 
  0.840
101267054
annotation not available (3587 aa)
     
   
  0.740
101263645
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (1012 aa)
           
  0.686
Solyc01g074010.2.1
Protein kinase superfamily protein (693 aa)
     
   
  0.681
101253639
Thioredoxin superfamily protein (251 aa)
           
  0.675
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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