STRINGSTRING
Solyc10g079000.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079000.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079000.1.1Uncharacterized protein (194 aa)    
Predicted Functional Partners:
Solyc02g090540.2.1
Uncharacterized protein (246 aa)
       
      0.627
Solyc02g065060.2.1
Uncharacterized protein (266 aa)
       
      0.627
Solyc12g042920.1.1
Uncharacterized protein (324 aa)
       
      0.607
Solyc06g067920.2.1
Uncharacterized protein (320 aa)
       
      0.607
Solyc02g093900.2.1
Uncharacterized protein (269 aa)
       
      0.607
Solyc06g072510.2.1
Uncharacterized protein (362 aa)
       
      0.602
Solyc03g097840.2.1
Uncharacterized protein (352 aa)
       
      0.602
Solyc03g032030.2.1
Uncharacterized protein (324 aa)
       
      0.602
Solyc02g094470.2.1
Phosphorus transporter (358 aa)
       
      0.602
Solyc05g014150.2.1
Uncharacterized protein (210 aa)
       
      0.504
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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