STRINGSTRING
Solyc10g079040.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079040.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079040.1.1Uncharacterized protein (310 aa)    
Predicted Functional Partners:
CYP51
Obtusifoliol 14alpha-demethylase (487 aa)
 
 
  0.937
Solyc12g021130.1.1
Reticulon-like protein (577 aa)
     
 
  0.917
Solyc04g082750.2.1
Uncharacterized protein (478 aa)
     
 
  0.917
Solyc02g081730.2.1
Uncharacterized protein (419 aa)
     
 
  0.917
Solyc02g032330.2.1
Reticulon-like protein (538 aa)
     
 
  0.917
Solyc06g076410.2.1
C-4 methyl sterol oxidase (269 aa)
 
 
  0.858
Solyc06g005750.2.1
Uncharacterized protein (265 aa)
 
 
  0.857
Solyc05g047580.2.1
Terpene cyclase/mutase family member (731 aa)
 
   
  0.844
Solyc07g042630.2.1
Terpene cyclase/mutase family member (756 aa)
 
   
  0.839
lTTS1
Beta-amyrin synthase ; Oxidosqualene cyclase converting oxidosqualene into beta-amyrin, generating five rings and eight asymmetric centers in a single transformation (761 aa)
 
   
  0.838
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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