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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc10g079060.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079060.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079060.1.1annotation not available (427 aa)    
Predicted Functional Partners:
bc2.1
annotation not available (463 aa)
   
 
  0.978
Solyc04g077440.2.1
annotation not available (525 aa)
   
 
  0.975
TPS35
Terpene synthase (556 aa)
         
  0.910
TPS33
Terpene synthase (552 aa)
         
  0.910
101258440
annotation not available (562 aa)
         
    0.900
101260508
Uncharacterized protein; Terpene synthase (547 aa)
         
    0.900
Solyc00g154480.1.1
annotation not available (521 aa)
         
    0.900
FTB
Farnesyl-protein transferase beta subunit (457 aa)
     
 
  0.884
FPS1
Farnesyl pyrophosphate synthase ; Belongs to the FPP/GGPP synthase family (342 aa)
   
  0.882
CYP51
Uncharacterized protein; Obtusifoliol 14alpha-demethylase ; Belongs to the cytochrome P450 family (487 aa)
   
 
  0.870
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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