STRINGSTRING
Solyc10g079060.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079060.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079060.1.1Uncharacterized protein (427 aa)    
Predicted Functional Partners:
bc2.1
Squalene epoxidase 3-like (EC-1.14.13.132) (463 aa)
   
 
  0.956
FPS1
Farnesyl pyrophosphate synthase (342 aa)
   
  0.941
Solyc10g005840.2.1
Uncharacterized protein (248 aa)
   
  0.941
Solyc10g005820.1.1
Uncharacterized protein (119 aa)
   
  0.941
Solyc12g021130.1.1
Reticulon-like protein (577 aa)
     
 
  0.917
Solyc04g082750.2.1
Uncharacterized protein (478 aa)
     
 
  0.917
Solyc02g081730.2.1
Uncharacterized protein (419 aa)
     
 
  0.917
Solyc02g032330.2.1
Reticulon-like protein (538 aa)
     
 
  0.917
CYP51
Obtusifoliol 14alpha-demethylase (487 aa)
   
 
  0.908
GGPS1
Geranylgeranyl pyrophosphate synthase 1 (365 aa)
   
  0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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